Best Alignments for T0454

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2uxuA	1.6256e-25	2uxuA/T0454-2uxuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bhqA	8.2795e-25	3bhqA/T0454-3bhqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f07A	8.3430e-25	2f07A/T0454-2f07A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bcgA	1.0700e-24	3bcgA/T0454-3bcgA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ibdA	1.7067e-24	2ibdA/T0454-2ibdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hyjA	3.8165e-24	2hyjA/T0454-2hyjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qcoA	5.5223e-24	2qcoA/T0454-2qcoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3c2bA	7.2261e-24	3c2bA/T0454-3c2bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qvtA	8.5364e-24	1qvtA/T0454-1qvtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
3bruA	1.0910e-23	3bruA/T0454-3bruA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2genA	1.1346e-23	2genA/T0454-2genA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
1rktA	1.2446e-23	1rktA/T0454-1rktA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
3crjA	1.5061e-23	3crjA/T0454-3crjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cdlA	1.5433e-23	3cdlA/T0454-3cdlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2id6A	1.9567e-23	2id6A/T0454-2id6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pbxA	2.0337e-23	2pbxA/T0454-2pbxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2g3bA	2.1836e-23	2g3bA/T0454-2g3bA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
3b81A	2.2037e-23	3b81A/T0454-3b81A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2zb9A	2.7643e-23	2zb9A/T0454-2zb9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rasA	2.7651e-23	2rasA/T0454-2rasA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001