Best Alignments for T0454

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2hyjA	2.1039e-28	2hyjA/T0454-2hyjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fx0A	2.3908e-27	2fx0A/T0454-2fx0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
1zkgA	4.4277e-27	1zkgA/T0454-1zkgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
3bruA	7.1794e-27	3bruA/T0454-3bruA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2id6A	9.4924e-27	2id6A/T0454-2id6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2g7sA	1.7083e-26	2g7sA/T0454-2g7sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
2i10A	2.2624e-26	2i10A/T0454-2i10A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
2rasA	2.6427e-26	2rasA/T0454-2rasA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bhqA	6.6149e-26	3bhqA/T0454-3bhqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f07A	1.2975e-25	2f07A/T0454-2f07A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2raeA	1.6471e-25	2raeA/T0454-2raeA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2iekA	2.8811e-25	2iekA/T0454-2iekA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2iu5A	4.5626e-25	2iu5A/T0454-2iu5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2g3bA	5.3339e-25	2g3bA/T0454-2g3bA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
2jj7A	6.0172e-25	2jj7A/T0454-2jj7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2uxuA	6.9788e-25	2uxuA/T0454-2uxuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cwrA	8.6975e-25	3cwrA/T0454-3cwrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2zb9A	9.1560e-25	2zb9A/T0454-2zb9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3crjA	9.8518e-25	3crjA/T0454-3crjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pbxA	1.2187e-24	2pbxA/T0454-2pbxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001