Best Alignments for T0454

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3bcgA	2.0126e-27	3bcgA/T0454-3bcgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bhqA	4.6043e-26	3bhqA/T0454-3bhqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qcoA	4.7186e-26	2qcoA/T0454-2qcoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2uxuA	3.0635e-25	2uxuA/T0454-2uxuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cjdA	8.3965e-25	3cjdA/T0454-3cjdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3b81A	9.7302e-25	3b81A/T0454-3b81A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qvtA	1.0906e-24	1qvtA/T0454-1qvtA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
3crjA	1.5299e-24	3crjA/T0454-3crjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jt6A	1.5605e-24	1jt6A/T0454-1jt6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
2genA	1.9442e-24	2genA/T0454-2genA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
3c2bA	2.9506e-24	3c2bA/T0454-3c2bA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2oi8A	3.8590e-24	2oi8A/T0454-2oi8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cdlA	4.7657e-24	3cdlA/T0454-3cdlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rktA	5.9842e-24	1rktA/T0454-1rktA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.1.9 a.121.1.1
2pbxA	6.2359e-24	2pbxA/T0454-2pbxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3colA	6.5642e-24	3colA/T0454-3colA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ibdA	6.9029e-24	2ibdA/T0454-2ibdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dg7A	7.4412e-24	2dg7A/T0454-2dg7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2zb9A	8.2360e-24	2zb9A/T0454-2zb9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ccyA	1.0311e-23	3ccyA/T0454-3ccyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001