ConstraintSet MQAC1.sheets # The longer of MQAC1-opt3 or try4-opt3 # from MQAC1 SheetConstraint (T0451)R107 (T0451)D113 (T0451)G127 (T0451)S121 hbond (T0451)A109 1 # lengthened to combine try3 and try4 SheetConstraint (T0451)F40 (T0451)P45 (T0451)C120 (T0451)Y125 hbond (T0451)W43 1 # from MQAC1 SheetConstraint (T0451)F112 (T0451)R115 (T0451)S121 (T0451)K118 hbond (T0451)R115 1 # from try4 SheetConstraint (T0451)T87 (T0451)F99 (T0451)V114 (T0451)K102 hbond (T0451)V89 1 # from MQAC1 SheetConstraint (T0451)I74 (T0451)V82 (T0451)G97 (T0451)V89 hbond (T0451)Q75 1 SheetConstraint (T0451)F40 (T0451)F44 (T0451)G55 (T0451)G51 hbond (T0451)F42 1 ConstraintSet MQAC1.helices # first helix lengthened as in try3 HelixConstraint (T0451)S6 (T0451)G27 HelixConstraint (T0451)E28 (T0451)L36 HelixConstraint (T0451)G55 (T0451)H71 SetCost \ align_constraints 50 \ ehl2_constraints 5 \ MQAC1.sheets 30 \ MQAC1.helices 20 \ nn1000 5 \ two_stage 5 \ pred_nb11_back 50 \ pred_alpha_back 10 \ pred_n_notor_back 5 \ pred_bys_back 5 \ pred_pb_back 3 \ wet6.5 15 dry5 15 dry6.5 15 dry8 40 dry12 40 \ phobic_fit 3 \ sidechain 5 \ n_ca_c 2 bad_peptide 5 \ soft_clashes 400 backbone_clashes 10 \ break 800 \ hbond_geom 10 \ hbond_geom_backbone 10 \ hbond_geom_beta 20 \ hbond_geom_beta_pair 40