Best Alignments for T0449

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2cirA/T0449-2cirA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cirA/T0449-2cirA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0619e-242.55e-84
2htaA/T0449-2htaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2htaA/T0449-2htaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.8520e-221.97e-81
1snzA/T0449-1snzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1snzA/T0449-1snzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.0826e-181.54e-79 b.30.5.4
1jovA/T0449-1jovA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1jovA/T0449-1jovA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2449e-142.59e-54 b.30.5.7
1z45A/T0449-1z45A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1z45A/T0449-1z45A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.8451e-136.40e-62 b.30.5.4
c.2.1.2
1ygaA/T0449-1ygaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ygaA/T0449-1ygaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5320e-123.91e-66
3bs6A/T0449-3bs6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bs6A/T0449-3bs6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3585e-011.58e-19
3blcA/T0449-3blcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3blcA/T0449-3blcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.4317e-014.75e-19
1o7dD/T0449-1o7dD-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1o7dD/T0449-1o7dD-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.4275e+002.83e-16
1qwdA/T0449-1qwdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1qwdA/T0449-1qwdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.7646e+008.30e-11 b.60.1.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001