Best Alignments for T0449

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1nszA	3.2671e-32	1nszA/T0449-1nszA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4
1snzA	3.5131e-32	1snzA/T0449-1snzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4
1lurA	8.4708e-32	1lurA/T0449-1lurA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4
2cirA	2.7734e-31	2cirA/T0449-2cirA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ygaA	5.7438e-31	1ygaA/T0449-1ygaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2htaA	3.1415e-30	2htaA/T0449-2htaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1z45A	5.4996e-30	1z45A/T0449-1z45A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4 c.2.1.2
1jovA	5.0727e-26	1jovA/T0449-1jovA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.7
1mmuA	3.0260e-05	1mmuA/T0449-1mmuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4
3blcA	1.5718e-02	3blcA/T0449-3blcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bs6A	1.8184e-02	3bs6A/T0449-3bs6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1v7wA	3.1556e+00	1v7wA/T0449-1v7wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.102.1.4 b.30.5.3
2cqsA	3.3596e+00	2cqsA/T0449-2cqsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yewA	6.8171e+00	1yewA/T0449-1yewA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1lf6A	1.0460e+01	1lf6A/T0449-1lf6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.102.1.5 b.30.5.5
2rdyA	1.3233e+01	2rdyA/T0449-2rdyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1h54A	3.2618e+01	1h54A/T0449-1h54A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.102.1.4 b.30.5.3
1vclA	3.6675e+01	1vclA/T0449-1vclA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.42.2.1 b.42.2.1 d.281.1.1
4ubpB	3.8533e+01	4ubpB/T0449-4ubpB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.3.1
3bpoC	4.4252e+01	3bpoC/T0449-3bpoC-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001