Best Alignments for T0449

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2cirA	4.0468e-31	2cirA/T0449-2cirA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2htaA	6.4741e-29	2htaA/T0449-2htaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1z45A	8.7580e-29	1z45A/T0449-1z45A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4 c.2.1.2
1nszA	1.7348e-28	1nszA/T0449-1nszA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4
1lurA	2.0644e-28	1lurA/T0449-1lurA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4
1snzA	8.1526e-28	1snzA/T0449-1snzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4
1mmuA	1.2663e-27	1mmuA/T0449-1mmuA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4
1ygaA	7.4690e-26	1ygaA/T0449-1ygaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jovA	2.5713e-23	1jovA/T0449-1jovA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.7
3blcA	2.0382e-01	3blcA/T0449-3blcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
4ubpB	1.5119e+01	4ubpB/T0449-4ubpB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.3.1
2j0fA	1.6786e+01	2j0fA/T0449-2j0fA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bs6A	1.8856e+01	3bs6A/T0449-3bs6A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xfcA	1.9469e+01	1xfcA/T0449-1xfcA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2nwfA	2.3504e+01	2nwfA/T0449-2nwfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wba	2.6701e+01	1wba/T0449-1wba-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yewA	2.7437e+01	1yewA/T0449-1yewA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ey4A	2.7891e+01	1ey4A/T0449-1ey4A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ubpB	2.7954e+01	1ubpB/T0449-1ubpB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.85.3.1
2rh0A	2.9061e+01	2rh0A/T0449-2rh0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001