Best Alignments for T0449

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1nszA	4.9048e-34	1nszA/T0449-1nszA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4
1snzA	4.9363e-34	1snzA/T0449-1snzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4
1ygaA	2.3644e-33	1ygaA/T0449-1ygaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1lurA	3.1692e-33	1lurA/T0449-1lurA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4
2cirA	5.9080e-31	2cirA/T0449-2cirA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2htaA	1.1828e-30	2htaA/T0449-2htaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1z45A	2.6608e-30	1z45A/T0449-1z45A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4 c.2.1.2
1jovA	8.0537e-28	1jovA/T0449-1jovA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.7
3bs6A	8.2004e-03	3bs6A/T0449-3bs6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3blcA	1.1549e-02	3blcA/T0449-3blcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2cqsA	3.4710e-01	2cqsA/T0449-2cqsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yewA	1.5642e+00	1yewA/T0449-1yewA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1v7wA	3.4887e+00	1v7wA/T0449-1v7wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.102.1.4 b.30.5.3
1lf6A	8.4732e+00	1lf6A/T0449-1lf6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.102.1.5 b.30.5.5
1qhtA	1.4729e+01	1qhtA/T0449-1qhtA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.3.5 e.8.1.1
1nbcA	1.7653e+01	1nbcA/T0449-1nbcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.2.2.2
3bgaA	1.9763e+01	3bgaA/T0449-3bgaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rc5A	2.7432e+01	2rc5A/T0449-2rc5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rdyA	2.7489e+01	2rdyA/T0449-2rdyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ix0A	2.7621e+01	2ix0A/T0449-2ix0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001