Best Alignments for T0449

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1snzA	5.8459e-32	1snzA/T0449-1snzA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4
2cirA	7.0582e-32	2cirA/T0449-2cirA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1nszA	1.1770e-31	1nszA/T0449-1nszA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4
1lurA	1.2143e-31	1lurA/T0449-1lurA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4
1ygaA	2.2116e-30	1ygaA/T0449-1ygaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2htaA	2.3007e-30	2htaA/T0449-2htaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1z45A	3.2097e-30	1z45A/T0449-1z45A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.4 c.2.1.2
1jovA	6.7403e-25	1jovA/T0449-1jovA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.30.5.7
3bs6A	1.0158e-03	3bs6A/T0449-3bs6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3blcA	5.5037e-03	3blcA/T0449-3blcA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1v7wA	4.0972e-01	1v7wA/T0449-1v7wA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.102.1.4 b.30.5.3
2rdyA	9.5318e-01	2rdyA/T0449-2rdyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1lf6A	3.7983e+00	1lf6A/T0449-1lf6A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.102.1.5 b.30.5.5
2cqsA	1.0656e+01	2cqsA/T0449-2cqsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2piaA	1.1682e+01	2piaA/T0449-2piaA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.43.4.2 c.25.1.2 d.15.4.2
1h54A	1.2550e+01	1h54A/T0449-1h54A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.102.1.4 b.30.5.3
1vclA	1.3561e+01	1vclA/T0449-1vclA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.42.2.1 b.42.2.1 d.281.1.1
3bpoC	1.8056e+01	3bpoC/T0449-3bpoC-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1go2A	2.3496e+01	1go2A/T0449-1go2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.43.4.2 c.25.1.1
2bw4A	2.3868e+01	2bw4A/T0449-2bw4A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.6.1.3 b.6.1.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001