Best Alignments for T0448

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
3bzwA/T0448-3bzwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bzwA/T0448-3bzwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.9553e-214.59e-99
1ivnA/T0448-1ivnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1ivnA/T0448-1ivnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.5139e-146.66e-75 c.23.10.5
2hsjA/T0448-2hsjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2hsjA/T0448-2hsjA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.5683e-138.30e-69
1vjgA/T0448-1vjgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vjgA/T0448-1vjgA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 8.3061e-126.04e-65 c.23.10.6
2vptA/T0448-2vptA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2vptA/T0448-2vptA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.7825e-113.41e-52
2o14A/T0448-2o14A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2o14A/T0448-2o14A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.7308e-101.87e-63
2q0sA/T0448-2q0sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2q0sA/T0448-2q0sA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 7.6657e-101.11e-72
1es9A/T0448-1es9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1es9A/T0448-1es9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.3093e-106.81e-53 1wab c.23.10.3
1k7cA/T0448-1k7cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k7cA/T0448-1k7cA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 3.2820e-098.97e-54 c.23.10.4
3bmaA/T0448-3bmaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 3bmaA/T0448-3bmaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.3663e-032.01e-28

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001