# List of top-scoring protein chains for t06-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3b77A	193	3.58e-11		
2cayA	145	1.075	b.55.1.12	130167
1nx8A	273	7.023	b.82.2.8	86374
1oihA	301	12.65	b.82.2.5	93051
1otjA	283	13.79	b.82.2.5	93517
1jr7A	311	14.94	b.82.2.3	63255
2r19A	159	15.12		
2hthB	140	39.26	b.55.1.12	136743
1eg2A	319	40.15	c.66.1.11	34249
1ktbA	405	46.87	b.71.1.1,c.1.8.1	72960,72961
2b5nA	323	62.24		
1yvoA	172	68.50	d.108.1.1	124106
2bsqA	146	75.83	c.120.1.1	129098
1t3yA	141	80.52	d.109.1.2	119141
1ornA	226	85.64	a.96.1.1	87342
2v0uA	146	89.03