# List of top-scoring protein chains for T0446.t04-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
3b77A	193	1.44e-10		
2cayA	145	9.286	b.55.1.12	130167
2dx5A	139	13.01	b.55.1.12	131866
1hbxG	157	28.27	a.4.5.21	60934
1urhA	280	39.40	c.46.1.2,c.46.1.2	99829,99830
1xdzA	240	45.92	c.66.1.20	115196
1w7pD	566	59.11	a.4.5.54,a.4.5.54	114325,114326
2hthB	140	60.99	b.55.1.12	136743
1ds9A	198	64.79	c.10.3.1	30879
1m9lA	199	64.93	c.10.3.1	84903
2etlA	228	79.52	d.3.1.6	132361
1jm1A	204	80.31	b.33.1.1	71745
1of5A	221	88.30	d.17.4.2	86933