Best Alignments for T0444

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1w68A	3.3874e-40	1w68A/T0444-1w68A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
2rccA	5.8387e-40	2rccA/T0444-2rccA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1syyA	2.7096e-39	1syyA/T0444-1syyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1mxrA	1.2011e-38	1mxrA/T0444-1mxrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1kgnA	3.3483e-38	1kgnA/T0444-1kgnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1jk0B	6.9318e-35	1jk0B/T0444-1jk0B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1xsm	2.7130e-22	1xsm/T0444-1xsm-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jk0A	6.2172e-22	1jk0A/T0444-1jk0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1xikA	3.3490e-21	1xikA/T0444-1xikA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1r2fA	5.0844e-20	1r2fA/T0444-1r2fA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
3chhA	9.4686e-13	3chhA/T0444-3chhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2jcdA	2.4256e-10	2jcdA/T0444-2jcdA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ribA	2.4466e-09	1ribA/T0444-1ribA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1av8A	4.6876e-09	1av8A/T0444-1av8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1biqA	6.9525e-09	1biqA/T0444-1biqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1mhyB	4.0468e-05	1mhyB/T0444-1mhyB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
2inpC	7.7654e-05	2inpC/T0444-2inpC-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2incA	1.3664e-04	2incA/T0444-2incA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
2incB	4.5765e-04	2incB/T0444-2incB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1t0qA	7.0466e-04	1t0qA/T0444-1t0qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001