Best Alignments for T0444

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1xsm	5.5237e-47	1xsm/T0444-1xsm-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xikA	1.0097e-46	1xikA/T0444-1xikA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
2rccA	4.8202e-46	2rccA/T0444-2rccA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mxrA	5.0766e-46	1mxrA/T0444-1mxrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1w68A	1.1222e-45	1w68A/T0444-1w68A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1jk0A	1.5141e-45	1jk0A/T0444-1jk0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1ribA	2.9193e-45	1ribA/T0444-1ribA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1syyA	3.7990e-45	1syyA/T0444-1syyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1av8A	4.8124e-44	1av8A/T0444-1av8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1biqA	2.6311e-43	1biqA/T0444-1biqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1kgnA	8.2629e-42	1kgnA/T0444-1kgnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1jk0B	9.4062e-39	1jk0B/T0444-1jk0B-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1r2fA	2.5808e-38	1r2fA/T0444-1r2fA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1t0qA	8.6365e-03	1t0qA/T0444-1t0qA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1t0qB	9.7328e-03	1t0qB/T0444-1t0qB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
2oc5A	1.0024e-02	2oc5A/T0444-2oc5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2incA	7.2560e-02	2incA/T0444-2incA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1mhyB	7.3799e-02	1mhyB/T0444-1mhyB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1za0A	1.0346e-01	1za0A/T0444-1za0A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
2inpA	1.3648e-01	2inpA/T0444-2inpA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001