Best Alignments for T0444

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1xsm	4.0966e-37	1xsm/T0444-1xsm-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jk0A	6.0265e-37	1jk0A/T0444-1jk0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1w68A	9.0337e-37	1w68A/T0444-1w68A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
2rccA	9.3475e-37	2rccA/T0444-2rccA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1r2fA	8.1266e-36	1r2fA/T0444-1r2fA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1syyA	3.5535e-35	1syyA/T0444-1syyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1kgnA	1.0469e-34	1kgnA/T0444-1kgnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1mxrA	1.9679e-34	1mxrA/T0444-1mxrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1xikA	3.4983e-34	1xikA/T0444-1xikA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
1jk0B	3.1902e-32	1jk0B/T0444-1jk0B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
3chhA	2.9536e-12	3chhA/T0444-3chhA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2jcdA	3.1210e-10	2jcdA/T0444-2jcdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2incA	1.2284e-05	2incA/T0444-2incA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
2inpC	3.6475e-05	2inpC/T0444-2inpC-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2j2fA	1.9727e-04	2j2fA/T0444-2j2fA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t0qA	2.0551e-04	1t0qA/T0444-1t0qA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
2incB	5.2518e-04	2incB/T0444-2incB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
2uw1A	9.6653e-04	2uw1A/T0444-2uw1A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1za0A	2.5615e-03	1za0A/T0444-1za0A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.25.1.2
2inpA	3.7227e-03	2inpA/T0444-2inpA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001