ConstraintSet try1.sheets
SheetConstraint (T0443)A157 (T0443)N163	(T0443)L173 (T0443)D167	hbond (T0443)L159	1

ConstraintSet robetta_1.sheets
#I manually put these in, because the sheet is almost there in Robetta_TS1
SheetConstraint (T0443)R223 (T0443)I226	(T0443)R162 (T0443)L159	hbond (T0443)I225	1

ConstraintSet psi3.helices
# HelixConstraint (T0443)P3	(T0443)A16
# HelixConstraint (T0443)S14	(T0443)G19
# HelixConstraint (T0443)G20	(T0443)G25
# HelixConstraint (T0443)L31	(T0443)N41
# HelixConstraint (T0443)N40	(T0443)F45
# HelixConstraint (T0443)H43	(T0443)F57
# HelixConstraint (T0443)D58	(T0443)A73
# HelixConstraint (T0443)T77	(T0443)E82
# HelixConstraint (T0443)Q81	(T0443)Q92
# HelixConstraint (T0443)S97	(T0443)L103
# HelixConstraint (T0443)L101	(T0443)Q117
# HelixConstraint (T0443)T133	(T0443)Y143
HelixConstraint (T0443)D174	(T0443)G185
HelixConstraint (T0443)S190	(T0443)M202
HelixConstraint (T0443)I211	(T0443)E221
# HelixConstraint (T0443)S228	(T0443)N235
# HelixConstraint (T0443)S242	(T0443)S247


ConstraintSet zhang4.helices
HelixConstraint (T0443)P3	(T0443)R18
HelixConstraint (T0443)Q28	(T0443)D47
HelixConstraint (T0443)S59	(T0443)A73
HelixConstraint (T0443)T77	(T0443)I83
HelixConstraint (T0443)Q81	(T0443)S93
HelixConstraint (T0443)S97	(T0443)V115
# HelixConstraint (T0443)A137	(T0443)R144
# HelixConstraint (T0443)G175	(T0443)S186
# HelixConstraint (T0443)F191	(T0443)M202
# HelixConstraint (T0443)K209	(T0443)R223

SetCost \
	try1.sheets 30 \
	robetta_1.sheets 40 \
	psi3.helices 10 \
	zhang4.helices 10 \
	align_constraints 10 \
	ehl2_constraints 5 \
	pred_nb11_back 90 \
	pred_alpha_back 10 \
	pred_n_notor_back 5 \
	pred_bys_back 5 \
	pred_pb_back 3 \
	wet6.5 15  dry5 15 dry6.5 15 dry8 40 dry12 40 \
	phobic_fit 3 \
	sidechain 5 \
	n_ca_c	2 bad_peptide 5 \
	soft_clashes 50  backbone_clashes 10 \
	break 150  \
	hbond_geom 10 \
	hbond_geom_backbone 10 \
	hbond_geom_beta 20 \
	hbond_geom_beta_pair 40 \
	missing_atoms 20