# List of top-scoring protein chains for T0443.t2k-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1tv8A	340	14.20	c.1.28.3	107352
2fb2A	340	16.57		
2guiA	194	18.95	c.55.3.5	135737
1j54A	186	19.01	c.55.3.5	77077
1iurA	88	31.00	a.2.3.1	90704
2ozzA	231	32.71		
1v9mA	323	41.97	f.40.1.1	100543
2hdcA	97	51.77	a.4.5.14	16146
2hfhA	109	52.80	a.4.5.14	16145
2f6sA	201	65.18	a.265.1.1	133058
1b0nB	57	72.22	a.34.1.1	17002
1l0wA	580	76.27	b.40.4.1,d.74.4.1,d.104.1.1	73426,73427,73428
2b3uA	171	85.96	d.108.1.1	127797
1lnwA	147	86.92	a.4.5.28	78104
2jevA	174	89.88	d.108.1.1	138287