# List of top-scoring protein chains for t2k-w0.5-1-CB_burial_14_7-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1jmkC	230	11.95	c.69.1.22	71747
3b73A	111	13.20		
2adbA	148	14.80	d.58.7.1	126581
2it9A	127	15.19	d.18.1.3	137634
1u5tB	169	24.36	a.4.5.54,a.4.5.54	107686,107687
2e9xC	219	25.54		
2cmxA	118	29.71		
2vqcA	118	29.71		
1xmaA	145	32.96	a.4.5.61	115477
2coiA	386	34.85		
1ekfA	365	43.43	e.17.1.1	59445
1w0hA	204	43.84	c.55.3.5	114064
2a1hA	365	45.24	e.17.1.1	125997
1knqA	175	47.65	c.37.1.17	72786
1ewxA	146	48.37	c.47.1.10	33062
1ashA	150	49.53	a.1.1.2	15622
1m9zA	111	52.59	g.7.1.3	78881
2d3qA	442	55.63	d.58.4.14	131214
1ktzB	122	57.04	g.7.1.3	68868
1yzfA	195	57.21	c.23.10.5	124275
1r45A	204	59.53	d.166.1.1	111683
1yf3A	259	61.80	c.66.1.28	123046
1j54A	186	63.66	c.55.3.5	77077
1iurA	88	64.22	a.2.3.1	90704
1uehA	253	65.93	c.101.1.1	99259
2f2hA	773	68.36	b.150.1.1,b.30.5.11,b.71.1.4,c.1.8.13	132818,132819,132820,132821
2obiA	183	76.42		
2nvnA	122	80.09	d.18.1.3	138633
1ve9A	347	81.74	c.4.1.2,d.16.1.3	100571,100572
3c7lA	137	85.84		
1sfxA	109	88.13	a.4.5.50	105505
1qmvA	197	89.21	c.47.1.10	33066
2o0jA	385	89.65