Best Alignments for T0443

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2coiA	1.1845e+01	2coiA/T0443-2coiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e1nA	1.2046e+01	2e1nA/T0443-2e1nA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ia0A	3.0365e+01	2ia0A/T0443-2ia0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mzbA	3.5367e+01	1mzbA/T0443-1mzbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.42
2p5vA	3.6469e+01	2p5vA/T0443-2p5vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dbbA	3.6977e+01	2dbbA/T0443-2dbbA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ivmA	3.8286e+01	2ivmA/T0443-2ivmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2cfxA	4.3347e+01	2cfxA/T0443-2cfxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.32 d.58.4.2
1hs6A	4.3764e+01	1hs6A/T0443-1hs6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.118.1.7 b.98.1.1 d.92.1.13
2px6A	4.6115e+01	2px6A/T0443-2px6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qz8A	4.7190e+01	2qz8A/T0443-2qz8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t1uA	4.7733e+01	1t1uA/T0443-1t1uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.43.1.3 c.43.1.3
2cg4A	5.0556e+01	2cg4A/T0443-2cg4A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.32 d.58.4.2
1gxqA	5.2320e+01	1gxqA/T0443-1gxqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.6.1
1r1uA	5.6285e+01	1r1uA/T0443-1r1uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.5.5
1opcA	5.7005e+01	1opcA/T0443-1opcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.4.6.1
1uocA	5.8262e+01	1uocA/T0443-1uocA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.3.9
1j3mA	5.8823e+01	1j3mA/T0443-1j3mA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.129.7.1
3b73A	5.9187e+01	3b73A/T0443-3b73A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2vj8A	6.0117e+01	2vj8A/T0443-2vj8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001