# List of top-scoring protein chains for t2k-w0.5-1-str2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1ri7A	171	3.988	a.4.5.32,d.58.4.2	97504,97505
1ekfA	365	4.863	e.17.1.1	59445
2cg4A	152	8.032	a.4.5.32,d.58.4.2	130417,130418
1i1gA	141	8.802	a.4.5.32,d.58.4.2	65982,65983
2qz8A	149	9.702		
2cyyA	151	9.726	a.4.5.32,d.58.4.2	131028,131029
2ivmA	150	11.62		
2p5vA	162	17.31		
2ozbB	260	18.67		
2dbbA	151	19.61		
1r5tA	142	19.99	c.97.1.1	104812
2ia0A	171	21.60		
2f2aB	483	21.80	a.182.1.2,d.128.1.5	132802,132803
1tvlA	454	22.10	c.1.16.4	107366
2imjA	166	22.88		
2cfxA	144	26.50	a.4.5.32,d.58.4.2	130395,130396
1uwzA	136	28.93	c.97.1.1	108081
1fmjA	351	32.30	c.37.1.5	59879
2gqqA	163	37.17		
1jtkA	136	38.60	c.97.1.1	71862
2cviA	83	45.40		
2i10A	202	48.96	a.4.1.9,a.121.1.1	136960,136961
2qbvA	90	50.15		
1h54A	754	51.31	a.102.1.4,b.30.5.3	60634,60635
1h5wA	309	51.35	e.27.1.1	65635
2o7oA	207	58.23	a.4.1.9,a.121.1.1	138930,138931
1whrA	124	60.20	d.68.7.1	114650
2gwhA	298	60.34		
3bcgA	215	61.70		
2e7xA	150	64.80		
2d5rA	252	65.75		
2pn6A	150	71.37		
1fj2A	232	71.71	c.69.1.14	34720
1aquA	297	76.36	c.37.1.5	31942
2ckfA	454	79.08		
1atnA	373	81.68	c.55.1.1,c.55.1.1	33437,33438
1csnA	298	81.75	d.144.1.7	41664
1wlqC	201	81.75	a.4.5.52	109400
2djwA	92	82.52		
1ufbA	127	82.97	a.24.16.3	99331
2v6xA	85	86.38