# List of top-scoring protein chains for t2k-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1ekfA	365	5.845	e.17.1.1	59445
1ri7A	171	7.641	a.4.5.32,d.58.4.2	97504,97505
1i1gA	141	16.04	a.4.5.32,d.58.4.2	65982,65983
1h5wA	309	16.52	e.27.1.1	65635
2cg4A	152	17.68	a.4.5.32,d.58.4.2	130417,130418
2cyyA	151	19.71	a.4.5.32,d.58.4.2	131028,131029
2ozbB	260	20.92		
2qz8A	149	24.32		
2ivmA	150	26.27		
1tvlA	454	29.75	c.1.16.4	107366
2imjA	166	34.23		
2dbbA	151	38.13		
2gqqA	163	41.95		
2zb9A	214	42.26		
2f2aB	483	45.86	a.182.1.2,d.128.1.5	132802,132803
2p5vA	162	48.48		
2ia0A	171	57.07		
2agaA	190	59.05		
2cviA	83	63.38		
1tdzA	272	63.68	a.156.1.2,b.113.1.1,g.39.1.8	106787,106788,106789
1whrA	124	64.26	d.68.7.1	114650
1r5tA	142	65.17	c.97.1.1	104812
1rz3A	201	65.23	c.37.1.6	98132
2cfxA	144	67.22	a.4.5.32,d.58.4.2	130395,130396
1uf2C	421	71.53	a.115.1.3,b.19.1.1	99291,99292
2qbvA	90	72.28		
1u04A	771	74.98	b.34.14.1,c.55.3.10	107539,107540
3bcgA	215	76.24		
2o7oA	207	77.40	a.4.1.9,a.121.1.1	138930,138931
1uwzA	136	77.85	c.97.1.1	108081
1pe1A	267	80.48	c.1.10.4	94591
1fj2A	232	82.17	c.69.1.14	34720
1k8kB	394	84.84	c.55.1.1	68307
1th8A	145	85.46	d.122.1.3	106908
1nf3A	195	85.55	c.37.1.8	85594
2p5yA	311	86.58