Best Alignments for T0443

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1b0uA	1.8005e+01	1b0uA/T0443-1b0uA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.12
1z2aA	3.2740e+01	1z2aA/T0443-1z2aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
1ispA	3.2991e+01	1ispA/T0443-1ispA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.69.1.18
2ipiA	3.9931e+01	2ipiA/T0443-2ipiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3c9pA	4.0317e+01	3c9pA/T0443-3c9pA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2erxA	5.0606e+01	2erxA/T0443-2erxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
1heiA	5.6952e+01	1heiA/T0443-1heiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.14 c.37.1.14
1pujA	6.1401e+01	1pujA/T0443-1pujA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
2hy5B	6.5318e+01	2hy5B/T0443-2hy5B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.114.1.1
1nz0A	7.2372e+01	1nz0A/T0443-1nz0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1h5wA	7.2501e+01	1h5wA/T0443-1h5wA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1lrzA	7.6686e+01	1lrzA/T0443-1lrzA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.2.7.4 d.108.1.4 d.108.1.4
1f9mA	7.9532e+01	1f9mA/T0443-1f9mA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.1
1jpyA	8.0081e+01	1jpyA/T0443-1jpyA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	g.17.1.6
2fwhA	8.5126e+01	2fwhA/T0443-2fwhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.47.1.1
2r76A	9.1589e+01	2r76A/T0443-2r76A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gj8A	9.4672e+01	2gj8A/T0443-2gj8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
2qx5A	9.4906e+01	2qx5A/T0443-2qx5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vhvA	9.6132e+01	1vhvA/T0443-1vhvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bsxA	9.7392e+01	2bsxA/T0443-2bsxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.56.2.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001