Best Alignments for T0441

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template Template E-value A2M alignment SCOP Domain(s)
1efaA 1.6036e-44 1efaA/T0441-1efaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m a.35.1.5
c.93.1.1
1jftA 2.0037e-41 1jftA/T0441-1jftA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m a.35.1.5
c.93.1.1
1vpwA 6.5317e-40 1vpwA/T0441-1vpwA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m a.35.1.5
c.93.1.1
3bblA 7.4015e-39 3bblA/T0441-3bblA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qpzA 1.2930e-38 1qpzA/T0441-1qpzA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m a.35.1.5
c.93.1.1
3brqA 3.0250e-38 3brqA/T0441-3brqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2iksA 3.6492e-37 2iksA/T0441-2iksA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cs3A 5.7491e-37 3cs3A/T0441-3cs3A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2o20A 1.3036e-36 2o20A/T0441-2o20A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fepA 8.0094e-35 2fepA/T0441-2fepA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3c3kA 3.3753e-34 3c3kA/T0441-3c3kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2rgyA 3.7737e-34 2rgyA/T0441-2rgyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1tlfA 1.5540e-33 1tlfA/T0441-1tlfA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m c.93.1.1
2qu7A 1.2120e-32 2qu7A/T0441-2qu7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3bilA 1.6509e-31 3bilA/T0441-3bilA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1dbqA 4.0956e-31 1dbqA/T0441-1dbqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m c.93.1.1
2ioyA 5.6188e-31 2ioyA/T0441-2ioyA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1bykA 9.7843e-31 1bykA/T0441-1bykA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m c.93.1.1
3clkA 1.5113e-30 3clkA/T0441-3clkA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2h0aA 3.6197e-30 2h0aA/T0441-2h0aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001