Best Alignments for T0440

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2yxoA	1.2381e-18	2yxoA/T0440-2yxoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1m65A	2.2513e-14	1m65A/T0440-1m65A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.6.3.1
2anuA	3.4468e-12	2anuA/T0440-2anuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.6.3.1
2hnhA	5.1927e-08	2hnhA/T0440-2hnhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1v77A	3.4887e-07	1v77A/T0440-1v77A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.6.3.2
1vflA	9.5135e-02	1vflA/T0440-1vflA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.1
1j6oA	2.7054e-01	1j6oA/T0440-1j6oA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.12
2ffiA	3.4802e-01	2ffiA/T0440-2ffiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.15
2ob3A	3.6819e-01	2ob3A/T0440-2ob3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2vc7A	5.3792e-01	2vc7A/T0440-2vc7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pajA	5.4292e-01	2pajA/T0440-2pajA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qahA	5.9753e-01	2qahA/T0440-2qahA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qt3A	6.0403e-01	2qt3A/T0440-2qt3A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3c86A	7.3442e-01	3c86A/T0440-3c86A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pgfA	8.1283e-01	2pgfA/T0440-2pgfA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gzxA	8.7673e-01	2gzxA/T0440-2gzxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gokA	9.5243e-01	2gokA/T0440-2gokA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gkrA	1.3147e+00	1gkrA/T0440-1gkrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.92.1.3 c.1.9.6
1zzmA	1.3536e+00	1zzmA/T0440-1zzmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.9.12
1muwA	1.4723e+00	1muwA/T0440-1muwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.15.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001