# List of top-scoring protein chains for t2k-w0.5-1-str4-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2jz5A	91	4.14e-11		
1uliB	187	11.23	d.17.4.4	107923
2cc6A	68	12.36	d.230.2.1	130218
2ehbD	143	12.53		
1zpvA	91	14.98	d.58.18.7	125475
2zfdB	123	17.03		
1skoB	130	22.78	d.110.7.1	105677
1y4oA	104	23.93		
2cz8A	69	26.90		
2ew0A	192	27.49	d.310.1.1	132445
1u55A	188	32.22	d.278.1.1	107677
1mogA	67	32.80	d.230.2.1	85034
1vetB	125	39.12	d.110.7.1	108554
2b95A	106	39.29		
1a7lA	389	42.12	c.94.1.1	35787
1eaf	243	49.71		
2o09A	189	52.29		
1xo8A	151	54.97	b.1.25.1	115698
1j27A	102	61.29	d.58.50.1	90778
2ii3A	262	62.20		
1b5sA	242	67.54	c.43.1.1	32626
2a67A	167	67.85		
1p9rA	418	68.96	c.37.1.11	94399
1in0A	163	69.13	d.58.49.1,d.58.49.1	83694,83695
1k2yX	463	70.05	c.84.1.1,c.84.1.1,c.84.1.1,d.129.2.1	68063,68064,68065,68066
1v4pA	157	71.58	d.67.1.2	113533
1div	149	72.53		
1dpbA	243	74.16	c.43.1.1	32618
1anf	370	74.35		
1ru0A	105	76.61	d.74.1.1	111937
1bn5	478	83.49		
1zndA	174	84.52	b.60.1.1	125380
1vhsA	175	84.99	d.108.1.1	100698
1x1fA	149	85.41	b.55.1.1	121579
2e6rA	92	86.18		
1x89A	178	86.89	b.60.1.1	121799
2v8hA	474	88.44