# List of top-scoring protein chains for t2k-w0.5-1-n_notor-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2jz5A	91	3.09e-12		
2ehbD	143	5.758		
1zpvA	91	9.563	d.58.18.7	125475
2zfdB	123	12.30		
1uliB	187	26.20	d.17.4.4	107923
1t6lA	290	29.70	d.131.1.2,d.131.1.2	106574,106575
1y4oA	104	31.99		
2b95A	106	34.59		
2cc6A	68	42.08	d.230.2.1	130218
1eaf	243	43.52		
1skoB	130	44.63	d.110.7.1	105677
1b94A	244	46.52	c.52.1.2	33250
1b5sA	242	53.10	c.43.1.1	32626
1a7lA	389	54.36	c.94.1.1	35787
1wbaA	175	54.45	b.42.4.1	25591
1b96A	244	56.72	c.52.1.2	33268
1eonA	245	59.19	c.52.1.2	33238
1vetB	125	61.90	d.110.7.1	108554
1vhsA	175	62.23	d.108.1.1	100698
1z41A	338	62.56	c.1.4.1	124421
2ohwA	133	65.49		
2ew0A	192	65.79	d.310.1.1	132445
1xo8A	151	68.02	b.1.25.1	115698
1b97A	244	71.24	c.52.1.2	33252
1v4pA	157	71.93	d.67.1.2	113533
1qq4A	198	73.40	b.47.1.1	25768
1div	149	76.33		
1zndA	174	77.89	b.60.1.1	125380
1p5vA	235	80.05	b.1.11.1,b.7.2.1	87812,87813
2ii3A	262	81.24		
1k2yX	463	85.59	c.84.1.1,c.84.1.1,c.84.1.1,d.129.2.1	68063,68064,68065,68066
2cz8A	69	88.17