Best Alignments for T0437

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

A2M alignment AL alignment Template E-value Alignment cost FSSP rep SCOP Domain(s)
2jz5A/T0437-2jz5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2jz5A/T0437-2jz5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.4680e-128.07e-29
2cz8A/T0437-2cz8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2cz8A/T0437-2cz8A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 2.0282e+001.92e-09
1u55A/T0437-1u55A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1u55A/T0437-1u55A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 4.8710e+004.39e-07 d.278.1.1
1fnoA/T0437-1fnoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1fnoA/T0437-1fnoA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 5.1558e+001.86e-10 d.58.19.1
c.56.5.4
2ux9A/T0437-2ux9A-t04-global-adpstyle1.a2m 2ux9A/T0437-2ux9A-t04-global-adpstyle1.al 6.0412e+004.44e-01
2bjdA/T0437-2bjdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2bjdA/T0437-2bjdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 9.4826e+001.32e-07
1wr2A/T0437-1wr2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1wr2A/T0437-1wr2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.0023e+011.00e-09
1vixA/T0437-1vixA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1vixA/T0437-1vixA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.2773e+011.73e-08 c.56.5.4
d.58.19.1
1k2yX/T0437-1k2yX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 1k2yX/T0437-1k2yX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.3113e+014.13e-07 c.84.1.1
c.84.1.1
c.84.1.1
d.129.2.1
2rb9A/T0437-2rb9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m 2rb9A/T0437-2rb9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.al 1.6872e+011.00e-10

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001