# List of top-scoring protein chains for t2k-w0.5-1-str4-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2jz5A	91	1.25e-10		
2cc6A	68	10.26	d.230.2.1	130218
1uliB	187	12.03	d.17.4.4	107923
1zpvA	91	13.98	d.58.18.7	125475
2ehbD	143	18.38		
2ew0A	192	20.74	d.310.1.1	132445
2cz8A	69	21.01		
1j27A	102	22.81	d.58.50.1	90778
2zfdB	123	23.67		
1skoB	130	24.57	d.110.7.1	105677
1a7lA	389	25.02	c.94.1.1	35787
1u55A	188	29.30	d.278.1.1	107677
1eaf	243	32.08		
1mogA	67	37.51	d.230.2.1	85034
1k2yX	463	39.60	c.84.1.1,c.84.1.1,c.84.1.1,d.129.2.1	68063,68064,68065,68066
1xo8A	151	39.68	b.1.25.1	115698
2ii3A	262	46.64		
1b5sA	242	47.04	c.43.1.1	32626
1vetB	125	49.52	d.110.7.1	108554
1y4oA	104	49.53		
1anf	370	49.96		
1in0A	163	52.97	d.58.49.1,d.58.49.1	83694,83695
2e6rA	92	61.41		
1v4pA	157	61.60	d.67.1.2	113533
1dpbA	243	62.10	c.43.1.1	32618
2o09A	189	65.25		
1ru0A	105	68.22	d.74.1.1	111937
2v8hA	474	68.65		
2a67A	167	70.59		
1evhA	112	71.04	b.55.1.4	26997
1a9eA	277	76.16	b.1.1.2,d.19.1.1	20757,38268
1qq4A	198	79.68	b.47.1.1	25768
2cjaA	522	81.38		
2hq4A	161	82.97		
2b95A	106	84.66		
2q5wD	77	87.91		
1div	149	89.40