# List of top-scoring protein chains for t2k-w0.5-1-bys-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2jz5A	91	1.29e-11		
2cc6A	68	6.075	d.230.2.1	130218
1xo8A	151	8.246	b.1.25.1	115698
1zpvA	91	11.01	d.58.18.7	125475
2ehbD	143	11.66		
1mogA	67	18.10	d.230.2.1	85034
1a7lA	389	20.11	c.94.1.1	35787
2cz8A	69	25.16		
2zfdB	123	32.83		
1uliB	187	35.99	d.17.4.4	107923
1t6lA	290	40.46	d.131.1.2,d.131.1.2	106574,106575
1j27A	102	44.41	d.58.50.1	90778
3bxoA	239	44.64		
2gdnA	267	44.97		
3bkpA	232	46.78		
1ukkA	142	53.90	d.227.1.1	99491
1anf	370	56.89		
1qysA	106	59.18	k.41.1.1	96603
1qwiA	143	59.22	d.227.1.1	96474
2ew0A	192	65.17	d.310.1.1	132445
1wbaA	175	66.89	b.42.4.1	25591
2e6rA	92	68.06		
1vhsA	175	69.50	d.108.1.1	100698
2jmkA	111	70.14		
2q5wD	77	71.44		
1eaf	243	84.42