# List of top-scoring protein chains for t04-w0.5-1-dssp-ehl2-0.1-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2jz5A	91	4.79e-12		
2ehbD	143	0.4759		
1qgvA	142	1.971	c.47.1.8	33056
1pqnA	127	5.844	c.47.1.8	95025
1mogA	67	8.320	d.230.2.1	85034
1o60A	292	8.841	c.1.10.4	92532
2cz8A	69	12.04		
2aj2A	208	14.57	d.310.1.1	126840
2ux9A	69	17.29		
2dqaA	124	17.85		
2afcA	168	21.83	c.50.1.2	126676
2cc6A	68	23.85	d.230.2.1	130218
1wloA	136	24.55		
2bkrA	212	25.47	d.3.1.7	128710
2zfdB	123	31.03		
3bevA	274	32.27		
2ogtA	498	35.47		
1dcoA	104	36.89	d.74.1.1	39680
1vs1A	276	37.00		
1erzA	303	37.15	d.160.1.2	59498
2q5wD	77	39.76		
2nscA	109	40.75		
2ew0A	192	42.14	d.310.1.1	132445
1txkA	498	44.85	b.1.18.2,b.30.5.9	107425,107426
1j2rA	199	45.74	c.33.1.3	90788
1n4wA	504	51.67	c.3.1.2,d.16.1.1	91676,91677
2pspA	106	57.59	g.16.1.1,g.16.1.1	44730,44731
2b1xB	172	60.95	d.17.4.4	127677
1xbsA	149	68.30		
1qnaA	200	69.20	d.129.1.1,d.129.1.1	41226,41227
1mq4A	272	70.74	d.144.1.7	91391
1uliB	187	71.76	d.17.4.4	107923
1r44A	202	75.40	d.65.1.4	104787
2o5nA	319	79.22		
2a1hA	365	79.59	e.17.1.1	125997
2ohwA	133	81.91		
2hafA	211	83.90	d.310.1.1	136286