Best Alignments for T0429

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2qqrA	9.4682e+00	2qqrA/T0429-2qqrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2hqxA	1.0584e+01	2hqxA/T0429-2hqxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1
2yrvA	1.6363e+01	2yrvA/T0429-2yrvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mhnA	2.3531e+01	1mhnA/T0429-1mhnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1
1wgsA	2.5316e+01	1wgsA/T0429-1wgsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.3
2dkoB	2.9008e+01	2dkoB/T0429-2dkoB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2bkdN	3.8724e+01	2bkdN/T0429-2bkdN-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b0vA	4.0888e+01	2b0vA/T0429-2b0vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.113.1.1
2dyqA	4.1510e+01	2dyqA/T0429-2dyqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mi8A	4.2972e+01	1mi8A/T0429-1mi8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.86.1.2
1am2A	4.6970e+01	1am2A/T0429-1am2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.86.1.2
1sc3B	5.0463e+01	1sc3B/T0429-1sc3B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qtnB	5.2345e+01	1qtnB/T0429-1qtnB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gfaA	5.2488e+01	2gfaA/T0429-2gfaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1 b.34.9.1
2z0dA	5.2986e+01	2z0dA/T0429-2z0dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1nmeB	5.8760e+01	1nmeB/T0429-1nmeB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2cy7A	6.5297e+01	2cy7A/T0429-2cy7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1i8dA	6.5633e+01	1i8dA/T0429-1i8dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.43.4.3 b.43.4.3
2f5kA	6.6435e+01	2f5kA/T0429-2f5kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.3
1em2A	6.7216e+01	1em2A/T0429-1em2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.129.3.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001