Best Alignments for T0429

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2qqrA	5.1806e+00	2qqrA/T0429-2qqrA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mhnA	5.8685e+00	1mhnA/T0429-1mhnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1
1wgsA	7.6426e+00	1wgsA/T0429-1wgsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.3
1g5vA	1.1667e+01	1g5vA/T0429-1g5vA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1
2f5kA	2.7942e+01	2f5kA/T0429-2f5kA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.3
2gfaA	3.8245e+01	2gfaA/T0429-2gfaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1 b.34.9.1
1bvqA	4.1597e+01	1bvqA/T0429-1bvqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dkoB	4.6721e+01	2dkoB/T0429-2dkoB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2pzhA	4.7118e+01	2pzhA/T0429-2pzhA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2fncA	5.2260e+01	2fncA/T0429-2fncA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ghaA	5.3495e+01	2ghaA/T0429-2ghaA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1omp	5.7876e+01	1omp/T0429-1omp-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2j5aA	5.7894e+01	2j5aA/T0429-2j5aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wi5A	5.8685e+01	1wi5A/T0429-1wi5A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.40.4.5
1c3oB	5.9054e+01	1c3oB/T0429-1c3oB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1nmeB	5.9899e+01	1nmeB/T0429-1nmeB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qtnB	6.1038e+01	1qtnB/T0429-1qtnB-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2cy7A	6.3648e+01	2cy7A/T0429-2cy7A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2z0dA	6.3893e+01	2z0dA/T0429-2z0dA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ckxA	6.5042e+01	1ckxA/T0429-1ckxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001