Best Alignments for T0429

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2hqxA	7.7528e+00	2hqxA/T0429-2hqxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1
2yrvA	1.0721e+01	2yrvA/T0429-2yrvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qqrA	1.2473e+01	2qqrA/T0429-2qqrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dkoB	1.9846e+01	2dkoB/T0429-2dkoB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1am2A	2.3141e+01	1am2A/T0429-1am2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.86.1.2
2dyqA	2.3393e+01	2dyqA/T0429-2dyqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2b0vA	2.6944e+01	2b0vA/T0429-2b0vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.113.1.1
1kjwA	3.3086e+01	1kjwA/T0429-1kjwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.2.1 c.37.1.1
1sc3B	3.4909e+01	1sc3B/T0429-1sc3B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1llaA	3.8419e+01	1llaA/T0429-1llaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.85.1.1 a.86.1.1 b.1.18.3
1pyoB	4.0579e+01	1pyoB/T0429-1pyoB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2j01E	4.0812e+01	2j01E/T0429-2j01E-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1em2A	4.2174e+01	1em2A/T0429-1em2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.129.3.2
1wgsA	4.4822e+01	1wgsA/T0429-1wgsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.3
1dk8A	4.4988e+01	1dk8A/T0429-1dk8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.91.1.1
2bkdN	4.8813e+01	2bkdN/T0429-2bkdN-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1q5yA	5.1432e+01	1q5yA/T0429-1q5yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.18.4
2cy7A	5.4881e+01	2cy7A/T0429-2cy7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mhnA	5.5613e+01	1mhnA/T0429-1mhnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1
2z0dA	5.6465e+01	2z0dA/T0429-2z0dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001