# List of top-scoring protein chains for T0429.t06-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2nq3A	173	1.33e-05	b.7.1.1	138452
2ek2A	265	25.08		
1fjjA	159	45.04	b.17.1.2	59852
2e08A	265	46.78		
2dv3A	265	51.62		
2dv4A	265	51.80		
2e16A	265	52.09		
2ed5A	265	53.27		
2dv5A	265	53.51		
2e15A	265	53.62		
2p5fA	265	53.69		
2ejzA	265	54.06		
2p6dA	265	54.66		
2el1A	265	55.61		
2p5cA	265	55.61		
2egbA	265	57.34		
2e07A	265	57.95		
2dxvA	265	59.61		
2eldA	265	59.62		
2el2A	265	59.86		
2pciA	265	60.25		
2eh2A	265	60.91		
2ekaA	265	60.94		
2ek7A	265	61.51		
2e8hA	265	61.58		
1gwyA	175	61.72	b.97.1.1	83356
2pcgA	265	61.84		
2hutA	265	61.91		
2dekA	265	62.08	c.90.1.1	131430
2en5A	265	62.18		
2pckA	265	62.20		
2egsA	265	62.22		
2p6iA	265	62.26		
2eglA	265	62.27		
2eeqA	265	62.34		
2owgA	265	62.35		
2e4rA	265	62.48		
2p9dA	265	62.50		
2pcmA	265	62.61		
2e4nA	265	62.67		
2ejkA	265	62.94		
2el3A	265	63.53		
2emrA	265	63.59		
2e17A	265	63.60		
2ek4A	265	63.92		
2el0A	265	63.98		
2ehcA	265	63.98		
2huvA	265	64.06		
2pcaA	265	64.20		
2ek3A	265	64.53		
2pb5A	265	64.93		
2e7rA	265	65.32		
2p6lA	265	65.60		
2p6kA	265	66.29		
2eh5A	265	66.33		
2e8qA	265	66.92		
2dsiA	265	67.20		
2pb6A	265	67.32		
2e8sA	265	67.58		
2dxwA	265	68.27		
2eleA	265	68.33		
2jp2A	126	68.51		
2dsgA	265	68.63		
2ejjA	265	69.71		
2owkA	265	70.63		
2pchA	265	71.00		
2ed3A	265	71.94		
2eh4A	265	72.33		
2e8rA	265	72.81		
2fgxA	107	74.39		
2z6rA	265	74.42		
2eniA	265	75.28		
2dshA	265	77.07		
2owuA	265	77.71		
2qpwA	149	77.92		
2pb4A	265	80.43		
2owvA	265	80.74		
2dv7A	265	84.03		
2emuA	265	85.42		
2ehlA	265	86.62