Best Alignments for T0429

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2hqxA	5.6687e+00	2hqxA/T0429-2hqxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1
1mi8A	5.9400e+00	1mi8A/T0429-1mi8A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.86.1.2
2yrvA	8.5702e+00	2yrvA/T0429-2yrvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2qqrA	8.9125e+00	2qqrA/T0429-2qqrA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1mhnA	1.4683e+01	1mhnA/T0429-1mhnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1
2bkdN	1.9638e+01	2bkdN/T0429-2bkdN-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wgsA	2.1776e+01	1wgsA/T0429-1wgsA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.3
2b0vA	3.2980e+01	2b0vA/T0429-2b0vA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.113.1.1
1w5rA	3.4179e+01	1w5rA/T0429-1w5rA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.3.1.5
1qtnB	3.5808e+01	1qtnB/T0429-1qtnB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1edgA	3.8852e+01	1edgA/T0429-1edgA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.8.3
1i8dA	3.9591e+01	1i8dA/T0429-1i8dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.43.4.3 b.43.4.3
2dkoB	3.9775e+01	2dkoB/T0429-2dkoB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dyqA	4.2673e+01	2dyqA/T0429-2dyqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2z0dA	4.5092e+01	2z0dA/T0429-2z0dA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1kzlA	4.6565e+01	1kzlA/T0429-1kzlA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.43.4.3 b.43.4.3
1sc3B	4.6981e+01	1sc3B/T0429-1sc3B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1nmeB	4.7793e+01	1nmeB/T0429-1nmeB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qwdA	4.9146e+01	1qwdA/T0429-1qwdA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.60.1.1
2f5kA	5.0016e+01	2f5kA/T0429-2f5kA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001