# List of top-scoring protein chains for T0429.t04-w0.5 hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2nq3A	173	1.40e-06	b.7.1.1	138452
1fjjA	159	24.73	b.17.1.2	59852
1gwyA	175	48.37	b.97.1.1	83356
2ek2A	265	51.56		
2fgxA	107	56.06		
1vi3A	170	61.56	b.17.1.2	100730
2qpwA	149	64.80		
2herA	368	76.45		
2dv4A	265	81.73		
2dv3A	265	82.90		
2jp2A	126	83.46		
2qkoA	215	84.60		
2el1A	265	88.16