Best Alignments for T0429

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1mhnA	3.7743e+00	1mhnA/T0429-1mhnA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1
1g5vA	9.9610e+00	1g5vA/T0429-1g5vA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1
2fhdA	2.4295e+01	2fhdA/T0429-2fhdA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2av9A	3.1166e+01	2av9A/T0429-2av9A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.38.1.1
1danT	3.3484e+01	1danT/T0429-1danT-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.1.2.1
2eryA	3.4305e+01	2eryA/T0429-2eryA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.37.1.8
2j5aA	3.5623e+01	2j5aA/T0429-2j5aA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1zc1A	4.0525e+01	1zc1A/T0429-1zc1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qqiA	5.1390e+01	1qqiA/T0429-1qqiA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wgsA	5.1951e+01	1wgsA/T0429-1wgsA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.3
1ris	5.3464e+01	1ris/T0429-1ris-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vqoK	5.7752e+01	1vqoK/T0429-1vqoK-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.39.1.1
1louA	5.8728e+01	1louA/T0429-1louA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.58.14.1
1ckxA	5.8784e+01	1ckxA/T0429-1ckxA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2d1vA	5.8919e+01	2d1vA/T0429-2d1vA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1dz1A	5.9107e+01	1dz1A/T0429-1dz1A-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.2
1bvqA	6.1401e+01	1bvqA/T0429-1bvqA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vqoA	6.1943e+01	1vqoA/T0429-1vqoA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.5.3 b.40.4.5
2hwvA	6.2178e+01	2hwvA/T0429-2hwvA-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1f2rI	6.2430e+01	1f2rI/T0429-1f2rI-t2k-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001