# List of top-scoring protein chains for t04-w0.5-1-CB8-sep9-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
1r7aA	504	16.87	b.71.1.1,c.1.8.1	97192,97193
1louA	101	32.57	d.58.14.1	39323
1ok0A	74	37.71	b.5.1.1	93191
1ohtA	215	38.11	d.118.1.1	87036
1kshA	186	41.79	c.37.1.8	72914
1hoe	74	42.46		
3bh0A	315	45.88		
1mr3F	181	51.26	c.37.1.8	79422
2ouxA	286	55.65		
1uptA	171	60.29	c.37.1.8	99767
2f2lX	167	64.45	d.118.1.1	132844
2yvyA	278	65.93		
2eryA	172	69.55	c.37.1.8	132306
1zjrA	211	74.02		
1edgA	380	74.08	c.1.8.3	28807
2ce2X	166	74.81		
1pjcA	361	82.46	c.2.1.4,c.23.12.2	30101,31361
1qwdA	177	90.00	b.60.1.1	96471