Best Alignments for T0429

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1mhnA	1.2185e+01	1mhnA/T0429-1mhnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1
2hqxA	1.4076e+01	2hqxA/T0429-2hqxA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1
2dkoB	1.4971e+01	2dkoB/T0429-2dkoB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1pyoB	2.1001e+01	1pyoB/T0429-1pyoB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rkiA	2.2520e+01	1rkiA/T0429-1rkiA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.308.1.2
2qqrA	2.3145e+01	2qqrA/T0429-2qqrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qtnB	2.5741e+01	1qtnB/T0429-1qtnB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e63A	2.5947e+01	2e63A/T0429-2e63A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2e2dC	2.6547e+01	2e2dC/T0429-2e2dC-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.40.3.1
2qdeA	2.7620e+01	2qdeA/T0429-2qdeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1sc3B	2.8049e+01	1sc3B/T0429-1sc3B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2f5kA	2.8977e+01	2f5kA/T0429-2f5kA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.3
2bkdN	2.9414e+01	2bkdN/T0429-2bkdN-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2gfaA	3.0335e+01	2gfaA/T0429-2gfaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1 b.34.9.1
1wgsA	3.1885e+01	1wgsA/T0429-1wgsA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.13.3
2yueA	3.2886e+01	2yueA/T0429-2yueA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1nmeB	3.8125e+01	1nmeB/T0429-1nmeB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2r7gA	4.2898e+01	2r7gA/T0429-2r7gA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1kjwA	4.9142e+01	1kjwA/T0429-1kjwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.2.1 c.37.1.1
1g5vA	5.1733e+01	1g5vA/T0429-1g5vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.9.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001