# List of top-scoring protein chains for t06-w0.5-1-CB8-sep9-0.3-scores hidden Markov model.
# HMM and HMM E-value scores computed by  SAM (c) 1992-2001 Regents of the University of California, Santa Cruz
# Sequence Alignment and Modeling Software System
#     http://www.cse.ucsc.edu/research/compbio/sam.html
# ----------------- Citations (SAM, SAM-T99, HMMs) --------------------
# R. Hughey, A. Krogh, Hidden Markov models for sequence analysis:
#  Extension and analysis of the basic method, CABIOS 12:95-107, 1996.
# K. Karplus, C. Barrett, R. Hughey, Hidden Markov models for detecting
#  remote protein homologies, Bioinformatics 14(10):846-856, 1998.
# A. Krogh et al., Hidden Markov models in computational biology:
#  Applications to protein modeling, JMB 235:1501-1531, Feb 1994.
#
#SCOP domains found in each protein chain taken from SCOP:
# ------------------Citations (SCOP) -----------------------------------
#Murzin A. G., Brenner S. E., Hubbard T., Chothia C. (1995).
#SCOP: a structural classification of proteins database for the investigation of sequences and structures.
#J. Mol. Biol. 247, 536-540.
Sequence_ID	Length	Target_Evalue	SCOP_domain	SCOP_suid
5S	5N	12S	12S	10N
2imgA	151	3.851		
2ov6A	101	4.479		
2f5vA	595	9.502	c.3.1.2,d.16.1.1	133010,133011
1rxdA	159	12.55	c.45.1.1	111959
2hxpA	155	14.50		
1zxuA	217	16.41	d.23.1.2	125796
1zzwA	149	17.11		
2i4rA	102	20.82		
2ex4A	241	24.23	c.66.1.42	132516
2jn9A	105	27.58		
2nt2A	145	28.42		
2gxaA	274	30.50		
1yz4A	160	32.00		
1th8A	145	32.42	d.122.1.3	106908
2i6jA	161	33.66		
2hcmA	164	34.95		
1tif	78	36.26		
1gd1O	334	37.82	c.2.1.3,d.81.1.1	29962,39877
1tifA	78	40.29	d.15.8.1	37836
2ahrA	259	50.15	a.100.1.10,c.2.1.6	126775,126776
1wrmA	165	52.28		
2j16A	182	53.24		
2e58A	308	53.38		
2e0tA	151	54.23		
2esbA	188	55.52		
2qaiA	111	58.30		
1xtpA	254	60.47	c.66.1.42	116031
2p4dA	172	61.03		
2e72A	49	65.92		
1fpzA	212	70.02	c.45.1.1	59976
2ov0A	105	76.87		
2jgbA	195	78.48