Best Alignments for T0427

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1hr6B	8.1436e-70	1hr6B/T0427-1hr6B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
3cx5A	4.1661e-66	3cx5A/T0427-3cx5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ppjA	1.4231e-62	1ppjA/T0427-1ppjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
1kb9A	2.8683e-60	1kb9A/T0427-1kb9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
2g47A	2.4395e-58	2g47A/T0427-2g47A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ppjB	3.5584e-58	1ppjB/T0427-1ppjB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
1q2lA	6.8732e-55	1q2lA/T0427-1q2lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
2fgeA	7.8415e-55	2fgeA/T0427-2fgeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
1hr6A	4.0300e-46	1hr6A/T0427-1hr6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
1kb9B	1.5167e-44	1kb9B/T0427-1kb9B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
3cx5B	2.2354e-41	3cx5B/T0427-3cx5B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ezvA	8.5980e-29	1ezvA/T0427-1ezvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
1ezvB	8.0592e-21	1ezvB/T0427-1ezvB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
1qcrA	1.7790e-09	1qcrA/T0427-1qcrA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
1xi9A	1.4058e+01	1xi9A/T0427-1xi9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.67.1.1
2i7qA	1.4379e+01	2i7qA/T0427-2i7qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2okjA	2.5084e+01	2okjA/T0427-2okjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1d2fA	2.6950e+01	1d2fA/T0427-1d2fA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.67.1.3
3buvA	2.8192e+01	3buvA/T0427-3buvA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1us0A	3.0390e+01	1us0A/T0427-1us0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.7.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001