Best Alignments for T0427

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3cx5A	1.3509e-71	3cx5A/T0427-3cx5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hr6B	1.1072e-69	1hr6B/T0427-1hr6B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
2g47A	6.6703e-60	2g47A/T0427-2g47A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1kb9A	2.6319e-59	1kb9A/T0427-1kb9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
1ezvA	1.2364e-57	1ezvA/T0427-1ezvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
1ppjA	2.7131e-57	1ppjA/T0427-1ppjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
1ppjB	2.1038e-56	1ppjB/T0427-1ppjB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
2fgeA	2.6403e-56	2fgeA/T0427-2fgeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
1q2lA	6.6467e-53	1q2lA/T0427-1q2lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
1ezvB	5.3917e-44	1ezvB/T0427-1ezvB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
1kb9B	4.6758e-43	1kb9B/T0427-1kb9B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
3cx5B	1.6841e-42	3cx5B/T0427-3cx5B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3buvA	3.5146e+00	3buvA/T0427-3buvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wyuB	6.5325e+00	1wyuB/T0427-1wyuB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.67.1.7
3broA	1.2847e+01	3broA/T0427-3broA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q83A	1.3074e+01	2q83A/T0427-2q83A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1t9xA	1.4043e+01	1t9xA/T0427-1t9xA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1l5aA	1.4390e+01	1l5aA/T0427-1l5aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.43.1.2 c.43.1.2
1i1iP	1.5600e+01	1i1iP/T0427-1i1iP-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.92.1.5
3bpvA	1.6150e+01	3bpvA/T0427-3bpvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001