Best Alignments for T0427

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1hr6A	4.5589e-79	1hr6A/T0427-1hr6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
1hr6B	1.9602e-75	1hr6B/T0427-1hr6B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
1ppjA	8.7364e-73	1ppjA/T0427-1ppjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
1kb9A	9.0771e-70	1kb9A/T0427-1kb9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
3cx5A	3.3796e-69	3cx5A/T0427-3cx5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ppjB	6.3425e-67	1ppjB/T0427-1ppjB-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
2g47A	1.4350e-64	2g47A/T0427-2g47A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1q2lA	2.8291e-63	1q2lA/T0427-1q2lA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
2fgeA	6.1085e-61	2fgeA/T0427-2fgeA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
1kb9B	1.5213e-51	1kb9B/T0427-1kb9B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
3cx5B	5.1088e-41	3cx5B/T0427-3cx5B-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i7qA	8.3568e-01	2i7qA/T0427-2i7qA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2okjA	5.1867e+00	2okjA/T0427-2okjA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2dplA	8.9318e+00	2dplA/T0427-2dplA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ig7A	9.5946e+00	2ig7A/T0427-2ig7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xi9A	9.9229e+00	1xi9A/T0427-1xi9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.67.1.1
1wyuA	1.0587e+01	1wyuA/T0427-1wyuA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.67.1.7
1tyhA	1.1229e+01	1tyhA/T0427-1tyhA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3
2ppqA	1.2179e+01	2ppqA/T0427-2ppqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1u69A	1.2359e+01	1u69A/T0427-1u69A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.32.1.7

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001