Best Alignments for T0427

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
3cx5A	1.6282e-69	3cx5A/T0427-3cx5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1hr6B	1.0505e-66	1hr6B/T0427-1hr6B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
2g47A	1.2822e-57	2g47A/T0427-2g47A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1kb9A	9.6616e-57	1kb9A/T0427-1kb9A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
1ezvA	4.3916e-55	1ezvA/T0427-1ezvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
1ppjA	2.4565e-54	1ppjA/T0427-1ppjA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
2fgeA	5.2890e-54	2fgeA/T0427-2fgeA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
1ppjB	7.9415e-54	1ppjB/T0427-1ppjB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
1q2lA	9.6757e-51	1q2lA/T0427-1q2lA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1 d.185.1.1 d.185.1.1
1ezvB	5.4221e-42	1ezvB/T0427-1ezvB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
1kb9B	5.6343e-41	1kb9B/T0427-1kb9B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.185.1.1 d.185.1.1
3cx5B	1.1543e-40	3cx5B/T0427-3cx5B-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1wyuB	3.7481e+00	1wyuB/T0427-1wyuB-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.67.1.7
1c7nA	8.0929e+00	1c7nA/T0427-1c7nA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.67.1.3
1d2fA	9.1770e+00	1d2fA/T0427-1d2fA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.67.1.3
1i1iP	9.3122e+00	1i1iP/T0427-1i1iP-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.92.1.5
2p4fA	9.8651e+00	2p4fA/T0427-2p4fA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3buvA	1.1929e+01	3buvA/T0427-3buvA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ynuA	1.2301e+01	1ynuA/T0427-1ynuA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.67.1.4
2f2gA	1.3308e+01	2f2gA/T0427-2f2gA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	a.132.1.3

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001