Best Alignments for T0425

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1jwqA	2.0680e-27	1jwqA/T0425-1jwqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.56.5.6
1xovA	1.1587e-23	1xovA/T0425-1xovA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.11.4 c.56.5.6
3bijA	3.3576e+00	3bijA/T0425-3bijA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cg2A	9.7788e+00	1cg2A/T0425-1cg2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.56.5.4 d.58.19.1
1iowA	1.0280e+01	1iowA/T0425-1iowA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.30.1.2 d.142.1.1
1gsa	1.0300e+01	1gsa/T0425-1gsa-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1iow	1.2363e+01	1iow/T0425-1iow-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jq5A	1.4458e+01	1jq5A/T0425-1jq5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.22.1.2
2q7dA	2.1519e+01	2q7dA/T0425-2q7dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ce9A	2.2992e+01	3ce9A/T0425-3ce9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1rrmA	2.8760e+01	1rrmA/T0425-1rrmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.22.1.2
2h0aA	2.9922e+01	2h0aA/T0425-2h0aA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i87A	3.1622e+01	2i87A/T0425-2i87A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2odtX	3.2362e+01	2odtX/T0425-2odtX-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1vljA	3.3252e+01	1vljA/T0425-1vljA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.22.1.2
1sbpA	3.4069e+01	1sbpA/T0425-1sbpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.94.1.1
1o2dA	3.4535e+01	1o2dA/T0425-1o2dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.22.1.2
1vhoA	3.5670e+01	1vhoA/T0425-1vhoA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.3.1 c.56.5.4
2rb7A	3.6722e+01	2rb7A/T0425-2rb7A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1yloA	4.1532e+01	1yloA/T0425-1yloA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.3.1 c.56.5.4

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001