Best Alignments for T0425

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1jwqA	1.0076e-27	1jwqA/T0425-1jwqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.56.5.6
1xovA	1.0374e-24	1xovA/T0425-1xovA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.11.4 c.56.5.6
3bijA	2.2200e+00	3bijA/T0425-3bijA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cg2A	2.8766e+00	1cg2A/T0425-1cg2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.56.5.4 d.58.19.1
1iow	3.0928e+00	1iow/T0425-1iow-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1iowA	3.9949e+00	1iowA/T0425-1iowA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.30.1.2 d.142.1.1
2q7dA	6.4290e+00	2q7dA/T0425-2q7dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gsa	6.8043e+00	1gsa/T0425-1gsa-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jq5A	9.4104e+00	1jq5A/T0425-1jq5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.22.1.2
1sbpA	1.2497e+01	1sbpA/T0425-1sbpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.94.1.1
3b2yA	1.6514e+01	3b2yA/T0425-3b2yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i6jA	1.8668e+01	2i6jA/T0425-2i6jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ce9A	2.0167e+01	3ce9A/T0425-3ce9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1d3vA	2.1215e+01	1d3vA/T0425-1d3vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.42.1.1
1rrmA	2.2348e+01	1rrmA/T0425-1rrmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.22.1.2
1gsaA	2.2951e+01	1gsaA/T0425-1gsaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.30.1.3 d.142.1.1
2g76A	2.6099e+01	2g76A/T0425-2g76A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xdwA	2.6703e+01	1xdwA/T0425-1xdwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1o2dA	2.7336e+01	1o2dA/T0425-1o2dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.22.1.2
2i87A	2.8657e+01	2i87A/T0425-2i87A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001