PFRMAT SS
TARGET T0425
AUTHOR SAM-T02-server
METHOD Using neural net t2k-5740-IDaaHr-5-15-7-15-9-15-13-ebghstl-seeded.net
METHOD This is a 4-layer network, with 
METHOD	window	units
METHOD	    5	   15
METHOD	    7	   15
METHOD	    9	   15
METHOD	   13	    7 (1 EBGHSTL )
METHOD The input amino acid frequencies were determined from
METHOD alignment T0425.t2k-thin90.a2m.gz
METHOD with weighted counts, using HenikoffWeight(-1 bits/column, 1)
METHOD Counts were regularized to probabilities using
METHOD /projects/compbio/lib/recode3.20comp
METHOD Total sequence weight for alignment was 431
METHOD
MODEL 1
M C 0.969
S C 0.718
K E 0.786
I E 0.953
I E 0.988
C E 0.970
L E 0.909
T C 0.545
A C 0.506
G C 0.331
H C 0.348
S S 0.394
N C 0.381
T C 0.260
D C 0.322
P T 0.492
G T 0.650
A E 0.445
V E 0.442
N T 0.274
G T 0.817
S T 0.688
D C 0.521
R C 0.569
E H 0.820
A H 0.910
D H 0.946
L H 0.971
A H 0.992
Q H 0.994
D H 0.997
M H 0.997
R H 0.997
N H 0.996
I H 0.994
V H 0.993
A H 0.992
S H 0.985
I H 0.979
L H 0.961
R H 0.860
N H 0.622
D T 0.613
Y T 0.793
G C 0.563
L E 0.740
T E 0.946
V E 0.972
K E 0.967
T E 0.914
D E 0.642
G C 0.375
T S 0.306
G S 0.435
K C 0.403
G C 0.297
N C 0.393
M C 0.541
P C 0.800
L H 0.724
R H 0.775
D H 0.813
A H 0.853
V H 0.860
K H 0.826
L H 0.747
I H 0.605
R H 0.375
G T 0.492
S C 0.764
D S 0.630
V E 0.970
A E 0.997
I E 0.997
E E 0.983
F E 0.890
H E 0.609
T C 0.475
N C 0.313
A C 0.323
A T 0.383
A T 0.322
N C 0.416
K T 0.331
T T 0.306
A C 0.322
T T 0.405
G E 0.325
I E 0.856
E E 0.971
A E 0.978
L E 0.957
S E 0.868
T E 0.618
P C 0.412
K S 0.388
N S 0.338
K T 0.296
R H 0.324
W H 0.579
C H 0.812
Q H 0.882
V H 0.941
L H 0.962
G H 0.967
K H 0.963
A H 0.953
V H 0.945
A H 0.939
K H 0.951
K H 0.949
T H 0.934
G H 0.926
W H 0.898
K H 0.841
L H 0.770
R H 0.673
G T 0.353
E C 0.336
D C 0.394
G C 0.367
F C 0.297
K C 0.264
P C 0.395
D C 0.390
N C 0.362
A C 0.350
G C 0.268
Q C 0.290
H E 0.702
S E 0.922
R E 0.940
L E 0.914
A E 0.702
Y C 0.372
A C 0.363
Q S 0.443
A S 0.557
G C 0.655
G E 0.797
I E 0.942
V E 0.952
F E 0.929
E E 0.856
P E 0.570
F E 0.416
F E 0.451
I E 0.306
S C 0.444
N C 0.601
D H 0.879
T H 0.899
D H 0.908
L H 0.893
A H 0.766
L H 0.536
F T 0.396
K T 0.350
T C 0.749
T H 0.778
K H 0.868
W H 0.919
G H 0.976
I H 0.984
C H 0.987
R H 0.991
A H 0.994
I H 0.995
A H 0.997
D H 0.998
A H 0.997
I H 0.994
A H 0.992
M H 0.996
E H 0.994
L H 0.976
G H 0.946
A H 0.859
A H 0.590
K T 0.384
V C 0.975
END