Best Alignments for T0425

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1jwqA	1.5380e-27	1jwqA/T0425-1jwqA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.56.5.6
1xovA	1.4696e-24	1xovA/T0425-1xovA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.11.4 c.56.5.6
3bijA	2.1305e+00	3bijA/T0425-3bijA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1cg2A	2.5535e+00	1cg2A/T0425-1cg2A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.56.5.4 d.58.19.1
1iow	2.9722e+00	1iow/T0425-1iow-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1iowA	4.0895e+00	1iowA/T0425-1iowA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.30.1.2 d.142.1.1
1gsa	6.7073e+00	1gsa/T0425-1gsa-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2q7dA	6.8280e+00	2q7dA/T0425-2q7dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1jq5A	9.2249e+00	1jq5A/T0425-1jq5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.22.1.2
1sbpA	1.2761e+01	1sbpA/T0425-1sbpA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.94.1.1
3b2yA	1.7568e+01	3b2yA/T0425-3b2yA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i6jA	1.9429e+01	2i6jA/T0425-2i6jA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3ce9A	1.9660e+01	3ce9A/T0425-3ce9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1d3vA	2.1869e+01	1d3vA/T0425-1d3vA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.42.1.1
1rrmA	2.3124e+01	1rrmA/T0425-1rrmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.22.1.2
1gsaA	2.3235e+01	1gsaA/T0425-1gsaA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.30.1.3 d.142.1.1
2i87A	2.4096e+01	2i87A/T0425-2i87A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2g76A	2.7190e+01	2g76A/T0425-2g76A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1xdwA	2.7550e+01	1xdwA/T0425-1xdwA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1o2dA	2.8661e+01	1o2dA/T0425-1o2dA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.22.1.2

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001