Best Alignments for T0425

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
1jwqA	4.8645e-29	1jwqA/T0425-1jwqA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.56.5.6
1xovA	4.9595e-23	1xovA/T0425-1xovA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.34.11.4 c.56.5.6
3bijA	1.9446e+00	3bijA/T0425-3bijA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1gsa	2.6485e+00	1gsa/T0425-1gsa-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2h0aA	3.8098e+00	2h0aA/T0425-2h0aA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1iowA	8.5877e+00	1iowA/T0425-1iowA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.30.1.2 d.142.1.1
2odtX	1.2227e+01	2odtX/T0425-2odtX-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2i87A	1.3246e+01	2i87A/T0425-2i87A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ccwA	1.3906e+01	1ccwA/T0425-1ccwA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.23.6.1
1yloA	1.4749e+01	1yloA/T0425-1yloA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	b.49.3.1 c.56.5.4
1cg2A	1.5261e+01	1cg2A/T0425-1cg2A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.56.5.4 d.58.19.1
1jq5A	1.5464e+01	1jq5A/T0425-1jq5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.22.1.2
2rb7A	1.6778e+01	2rb7A/T0425-2rb7A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1ujnA	1.6971e+01	1ujnA/T0425-1ujnA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.22.1.1
1vljA	1.8092e+01	1vljA/T0425-1vljA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	e.22.1.2
2dpiA	1.9396e+01	2dpiA/T0425-2dpiA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.240.1.1 e.8.1.7
2ef5A	2.0699e+01	2ef5A/T0425-2ef5A-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
3cpxA	2.0777e+01	3cpxA/T0425-3cpxA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1e4eA	2.0982e+01	1e4eA/T0425-1e4eA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.30.1.2 d.142.1.1
1vgyA	2.2206e+01	1vgyA/T0425-1vgyA-t04-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.56.5.4 d.58.19.1

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001