Best Alignments for T0423

To select the top models, SAM generates pairwise alignments of the target sequence and the best-scoring templates. The alignments with the best E-values are presented here.

Warning: E-values smaller than about 0.001 may be overly optimistic.

Template	Template E-value	A2M alignment	SCOP Domain(s)
2otmA	3.1754e-23	2otmA/T0423-2otmA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1x25A	6.5675e-21	1x25A/T0423-1x25A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1jd1A	6.8569e-21	1jd1A/T0423-1jd1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1qahA	6.9891e-21	1qahA/T0423-1qahA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1qd9A	1.4003e-20	1qd9A/T0423-1qd9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
2cvlA	1.4810e-20	2cvlA/T0423-2cvlA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
2uykA	1.5468e-20	2uykA/T0423-2uykA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1qu9A	1.6385e-20	1qu9A/T0423-1qu9A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1pf5A	4.2506e-20	1pf5A/T0423-1pf5A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
2ig8A	1.6359e-19	2ig8A/T0423-2ig8A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2ewcA	5.0158e-17	2ewcA/T0423-2ewcA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
2b33A	9.1369e-11	2b33A/T0423-2b33A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1oniA	1.5748e-10	1oniA/T0423-1oniA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.79.1.1
1zc6A	2.6748e+01	1zc6A/T0423-1zc6A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.55.1.5 c.55.1.5
1zl0A	5.2330e+01	1zl0A/T0423-1zl0A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.8.10.1 c.23.16.7
2ox1A	5.7827e+01	2ox1A/T0423-2ox1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
2yr1A	6.6319e+01	2yr1A/T0423-2yr1A-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m
1p9eA	6.7933e+01	1p9eA/T0423-1p9eA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	d.157.1.5
1sflA	6.8131e+01	1sflA/T0423-1sflA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m	c.1.10.1
2gmnA	7.1094e+01	2gmnA/T0423-2gmnA-t06-local-str2+near-backbone-11-0.8+0.6+0.8-adpstyle5.a2m

Please cite: Karplus, K. and Karchin, R. and Barrett, C. and Tu, S. and Cline, M. and Diekhans, M. and Grate, L. and Casper, J. and Hughey, R. ``What is the value added by human intervention in protein structure prediction?'' Proteins: Structure Function and Genetics 45(S5):86-91,2001